Also, we have the Affymetrix GeneChip® Scanner 3000 7G Plus Targeted Genotyping System in the Core. The software defines the probe cells and computes an intensity for each cell. Affymetrix GeneChip Scanner 3000 with Autoloader Affymetrix Gene Chip Scanner 3000 ( p/n 00-0073) The GeneChip Scanner 3000 is a product extension of the GeneChip Scanner 3000 series that allows next-generation higher density arrays, enabling new applications for genotyping with up to 500,000 SNPs, tiling arrays for transcription, and all-exon arrays for whole-genome analysis. Each workstation running Affymetrix Microarray Suite or GCOS can control one scanner. Data from the GeneChip Scanner 3000 is compatible with data from previous GeneChip Hybridization Total RNA was isolated from the frozen core biopsy and the non-LCM and LCM specimens according to protocols recom-mended by Affymetrix GeneChip (Affymetrix, Santa Clara, CA). Briefly, total RNA was isolated using TRIzol reagent (Invitrogen Corporation, Carlsbad, CA). View all listings from this project. Specifications . The Affymetrix Molecular Diagnostic Software (AMDS) manages assay workflows. sales@affymetrix.com support@affymetrix.com Affymetrix UK Ltd. Voyager, Mercury Park, Wycombe Lane, Wooburn Green, High Wycombe HP10 0HH United Kingdom Tel: +44 (0) 1628 552550 Fax: +44 (0) 1628 552585 saleseurope@affymetrix.com supporteurope@affymetrix.com Affymetrix Japan K.K. Mita NN Bldg., 16 F 4-1-23 Shiba, Minato-ku, Tokyo 108-0014 Japan In this chapter: Hardware Software AMDS User Interface Hardware Standard Hardware Components It is highly encouraged that bidders inspect items in … Finance for as low as... Best offer / month Click to Apply Now! This fourth-generation Affymetrix scanner is designed to give researchers peak scanning performance for a broad range of applications, including RNA expression and DNA analysis. It is flexibility from 16-, 24- to 96-array layouts for gene expression as well as 96- or 384 … Affymetrix Microarray Technology Microarray technology is a powerful tool for genetic research that utilizes nucleic acid hybridization techniques and recent advancements in computing technology to evaluate the mRNA expression profile of thousands of genes within a single experiment. Scanner 3000 7G. Scanner 3000 7G GeneChip® Operating Software (GCOS) v1.1.1, contains the High-Resolution Scanning Update or later 1 GeneChip Scanner 3000 High-Resolution Update is stan-dard on all instruments shipped starting in September 2003 with serial number series 502. The biotinylated aRNA was fragmented using the Affymetrix fragmentation buffer and hybridized to the Affymetrix® GeneChip array consisting of 22690 probe sets. Illumina says Affymetrix is infringing the ‘020 patent by making and selling the GeneChip HT RG-230 PM Array Plate, the GeneChipHT Rat Focus Array Plate, the GeneChip … Samples were subsequently passed Affymetrix GeneChip 3000 7G System with PC and Software Installed - Complete, Working System Its easy to find untested, individual components of a GeneChip system on the pre-owned market, but good luck finding a complete system that has actually been tested by knowledgeable technicians. GeneChip Scanner 3000 7G. It has the ability to scan all research arrays manufactured by Affymetrix including the high density expression arrays which place an entire genome on one GeneChip®. Listing #443116 This item is scheduled to appear in an upcoming auction. Description Affymetrix GeneChip 3000 System with PC and Software Installed - Complete, Working System Its easy to find untested, individual components of a GeneChip system on the pre-owned market, but good luck finding a complete system that has … GeneChip Scanner 3000 High-Resolution Scanning Patch Mouse 430A 2.0 GeneChip® Scanner 3000, enabled for High-Resolution Scanning,* and GeneChip Operating Software (GCOS) with the GeneChip Scanner 3000 High-Resolution Scanning Patch Mouse 430A GeneArray® 2500 Scanner or newer and Affymetrix® Microarray Suite version 5.0 or newer 100% working perfect condition. We do not have the capability or software to test them any further. Each workstation running Affymetrix®Microarray Suite can control one scanner. The software calculates an average of the two images, defines the probe cells and computes an intensity for each cell. The Affymetrix GeneChip Scanner 3000 7G is used to scan Affymetrix cartridge microarrays. The arrays were scanned using the Affymetrix GeneChip Scanner 3000. Each complete probe array image is stored in a separate data file identified by the experiment … Scanning: The Affymetrix GeneChip Scanner 3000 7G is used to generate the resultant GeneChip array image. The Affymetrix® GeneChip® HT Scanner is intended to scan HT Array Plates based on the Affymetrix GeneChip technology to measure fluorescence intensity levels. Listing# 550947 2 Affymetrix GeneChip Scanners With 6 Fluidics Stations; Listing# 550947 2 Affymetrix GeneChip Scanners With 6 Fluidics Stations. Compatible only with Affymetrix GeneChip cartridge microarrays; 0.5 µm–2.5 µm resolution; 16-bit dynamic range ; Details. GCRF offers a full microarray service that starts with total RNA including the following steps: the synthesis of cDNA, the synthesis of biotinylated cRNA, hybridization, staining, scanning and data analysis. Make an Inquiry Add To Watch List. Just removed from service. Raw image data is produced in .dat format. Affymetrix GeneChip Scanner 3000 7G The GeneChip® Scanner 3000 7G is an extension of the GeneChip® Scanner 3000 (GCS 3000) series that allows you to scan next-generation higher-density arrays, including SNP arrays with up to 900,000 SNPs, tiling arrays for transcription and all-exon arrays for whole-genome analysis. The Affymetrix GeneTitan instrument is a fully automated multi-channel genotyping and gene expression platform. The Affymetrix GeneChip system consists of the probe/gene microarray, hybridization oven, fluidics station, computer workstation and a scanner (Figure 1). The new Affymetrix Genome-Wide Human SNP Array 6.0 features 1.8 million genetic markers, including more than 906,600 single nucleotide polymorphisms (SNPs) and more than 946,000 probes for the detection of copy number variation. Affymetrix GeneChip 3000 7G Microarray Scanner Autoloader Oven 645 Fluidics 450. GeneChip™ Scanner 3000 7G Industry Gold Standard Microarray system with Automated Fluidics. The system is intended to be used only by laboratory professionals trained in laboratory techniques and on the use of the GeneChip system. ITEM DESCRIPTION ID# 32639 Affymetrix GeneChip Scanner 3000 w/ 450 Fluidics Station - Both the scanner and fluidics station power on and initialize. Manufacturer: Affymetrix; Fully-functional, complete system. The GeneChip® System 3000Dx v.2 (GCS 3000Dx v.2) consists of hardware and software components for processing microarrays based on assay parameters. Affymetrix ® GeneChip Scanner 3000 7G Plus Affymetrix ® Hybridization Oven 640 Affymetrix ® Fluidics Station 450 (x2) EquipNet Certified GCRF is able to process all Affymetrix higher density arrays including those requiring GCOS software and GeneChip. Affymetrix is a brand of DNA microarray products sold by Thermo Fisher Scientific that originated with an American biotechnology research and development and manufacturing company of the same name. the GeneChip Autoloader the GeneChip Scanner 3000 provides, sample tracking, temperature control and walk away freedom from scanning. Good physical condition with minor wear. Each probe array is scanned twice, taking up to ten minutes, depending on the array format. Sell Your Scanners. We have isolated RNA from both cell lines as well as tissue using TRIZOL per manufacturers suggestions and have had good results. RNA Isolation. Affymetrix is the pioneer of microarray technology, working with this technology scientific fraternity worldwide published more than 32000 papers in well reputed journals. Category: Scanner. View all Affymetrix Equipment. They are both in excellent cosmetic condition and come with reference cards. 2 Affymetrix GeneChip Scanners With 6 Fluidics Stations. View All Equipment at this Location. CSU Surplus Property is selling a AffyMetrix GeneChip Scanner that were previously used in a university setting. RNA for use in microarray experiments can be isolated in a number of ways. Download High Res Photos. Condition is Used. scan protocol - Affymetrix GeneChip Scanner 3000: Description: NL Affymetrix GeneChip 3’ IVT Express Kit: Data processing: Data analysis focused on probe sets with maximum signal log ratio (normalized relative expression) above 6, and standard deviation > 0.4 across tumors and normal samples. Used AFFYMETRIX GeneChip 3000 7G Microarray Scanner DNA Related For Sale - DOTmed Listing #2381899: This Affymetrix Genechip system is in excellent cosmetic condition. Includes PC with AGCC software installed. The GeneChip® Scanner 3000 7G is an extension of the GeneChip® Scanner 3000 (GCS 3000) series that allows you to scan next-generation higher-density arrays, including SNP arrays with up to 900,000 SNPs, tiling arrays for transcription and all-exon arrays for whole-genome analysis. Probe level intensity data is produced in .cel format. Arrays were washed, stained and processed using Affymetrix GeneChip Fluidics Station 450 systems: Scan protocol: Gene chips were scanned using the Affymetrix GeneChip Scanner 3000 7G for subsequent generation of raw data (*CEL files) Description: Gene expression of lung adenocarcinoma isolated from never-smoker patient 2: Data processing Following a 16-hour hybridization, the arrays were stained and washed according to the Affymetrix recommended protocol. View all Scanners. Inspected and tested by technician using a genome chip (human). Location: North Carolina, USA. Affymetrix GeneChip 3000 7G Microarray Scanner Autoloader. 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